Gene detail information of Glyur001973s00030835.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16120.1 | 1.00E-145 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004489110.1 | 0 | PREDICTED: monoglyceride lipase-like isoform X1 [Cicer arietinum] |
| COG | YP_003571913.1 | 2.00E-36 | lysophospholipase [Salinibacter ruber M8] |
| Swissprot | tr|Q9C942|CSE_ARATH | 4.00E-63 | Caffeoylshikimate esterase |
| trEMBL | tr|G7ZY16|G7ZY16_MEDTR | 0 | Monoglyceride lipase {ECO:0000313|EMBL:AES84106.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01973 | 24241 | 29378 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01054 | MGLL | EC:3.1.1.23 | Glycerolipid metabolism | map00561 |
| Regulation of lipolysis in adipocyte | map04923 | |||
| Retrograde endocannabinoid signaling | map04723 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001973s00030835.1 | PF12697.2 | Abhydrolase_6 | 129 | 369 | 3.50E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.302 |
| SRR1783600 | control | 7.236 |
| SRR1783602 | moderate drought stress | 4.561 |
| SRR1811619 | moderate drought stress | 4.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.737 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.471 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.870 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.693 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.555 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.608 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.829 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.154 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.570 |
| SRR2967015 | Control (Tissue:root) | 27.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.662 |
| SRR9715740 | Leave | 8.132 |
| SRR9715741 | Leave | 17.905 |
| SRR9715739 | Root | 13.979 |
| SRR9715742 | Root | 21.437 |
| SRR9715743 | Root | 19.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.080 |
| SRR8749028 | MeJA induced 9h | 8.482 |
| SRR8749029 | MeJA induced 9h | 8.339 |
| SRR8749030 | Uninduced | 9.221 |
| SRR8749031 | Uninduced | 11.779 |
| SRR8749032 | Uninduced | 10.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 27.802 |
| SRR8400027 | Control-Root | 24.382 |