Gene detail information of Glyur001973s00030841.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02570.16.00E-152Mannose-6-phosphate isomerase, type I
NRXP_004489108.10PREDICTED: mannose-6-phosphate isomerase 1-like [Cicer arietinum]
COGYP_288079.14.00E-55mannose-6-phosphate isomerase [Thermobifida fusca YX]
Swissprottr|Q9M884|MPI1_ARATH0Mannose-6-phosphate isomerase 1
trEMBLtr|Q5BMC5|Q5BMC5_CYATE0Phosphomannose isomerase {ECO:0000313|EMBL:AAX31279.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019734558750306-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01809manA, MPI EC:5.3.1.8 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0009298  GDP-mannose biosynthetic process


molecular_function

GO:0004476  mannose-6-phosphate isomerase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001973s00030841.1PF01238.16PMI_typeI163876.00E-107


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.905
SRR1783600control24.066
SRR1783602moderate drought stress26.389
SRR1811619moderate drought stress26.462

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.022
DRR006520Root Summer glycyrrhizin high producing strain15.049
DRR006521Root Winter glycyrrhizin high producing strain9.354
DRR006522Root Winter glycyrrhizin high producing strain9.006
DRR006523Root Summer glycyrrhizin low producing strain24.181
DRR006524Root Summer glycyrrhizin low producing strain24.466
DRR006525Leaf Summer glycyrrhizin high producing strain10.790
DRR006526Leaf Summer glycyrrhizin high producing strain10.699

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.231
SRR2868004Drought Stress(Tissue:root)8.643
SRR2967015Control (Tissue:root)15.370

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.514
SRR9715740Leave20.597
SRR9715741Leave12.961
SRR9715739Root13.978
SRR9715742Root22.048
SRR9715743Root22.219

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.414
SRR8749028MeJA induced 9h25.690
SRR8749029MeJA induced 9h42.222
SRR8749030Uninduced19.239
SRR8749031Uninduced17.776
SRR8749032Uninduced15.065

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.051
SRR8400027Control-Root13.727

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved