Gene detail information of Glyur001983s00033208.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18670.10Protein kinase superfamily protein
NRXP_003527095.10PREDICTED: probable serine/threonine-protein kinase At1g54610-like [Glycine max]
COGYP_003371239.15.00E-24serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|F4I114|Y1960_ARATH0Probable serine/threonine-protein kinase At1g09600
trEMBLtr|I1KCW0|I1KCW0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G21210.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019833650441712+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001983s00033208.1PF00069.20Pkinase1053893.70E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.142
SRR1783600control15.366
SRR1783602moderate drought stress7.383
SRR1811619moderate drought stress7.489

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.218
DRR006520Root Summer glycyrrhizin high producing strain19.220
DRR006521Root Winter glycyrrhizin high producing strain3.874
DRR006522Root Winter glycyrrhizin high producing strain3.694
DRR006523Root Summer glycyrrhizin low producing strain17.580
DRR006524Root Summer glycyrrhizin low producing strain17.591
DRR006525Leaf Summer glycyrrhizin high producing strain4.000
DRR006526Leaf Summer glycyrrhizin high producing strain3.916

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.717
SRR2868004Drought Stress(Tissue:root)14.366
SRR2967015Control (Tissue:root)14.235

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.727
SRR9715740Leave2.371
SRR9715741Leave3.283
SRR9715739Root3.466
SRR9715742Root12.447
SRR9715743Root10.641

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.377
SRR8749028MeJA induced 9h22.231
SRR8749029MeJA induced 9h5.917
SRR8749030Uninduced4.306
SRR8749031Uninduced1.542
SRR8749032Uninduced1.447

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.283
SRR8400027Control-Root26.070

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved