Gene detail information of Glyur001993s00044747.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26870.10non-specific phospholipase C2
NRKEH33501.10non-specific phospholipase C4 [Medicago truncatula]
COGYP_003881454.15.00E-53phospholipase C 4 [Dickeya dadantii 3937]
Swissprottr|O81020|NPC2_ARATH0Non-specific phospholipase C2 (Precursor)
trEMBLtr|A0A072UVR5|A0A072UVR5_MEDTR0Non-specific phospholipase C4 {ECO:0000313|EMBL:KEH33501.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019935707297+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01114plcC EC:3.1.4.3 Inositol phosphate metabolism map00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016788  hydrolase activity, acting on ester bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001993s00044747.1PF04185.9Phosphoesterase303921.20E-102


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.007
SRR1783600control6.136
SRR1783602moderate drought stress6.678
SRR1811619moderate drought stress6.305

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.976
DRR006520Root Summer glycyrrhizin high producing strain12.226
DRR006521Root Winter glycyrrhizin high producing strain2.264
DRR006522Root Winter glycyrrhizin high producing strain2.223
DRR006523Root Summer glycyrrhizin low producing strain10.427
DRR006524Root Summer glycyrrhizin low producing strain10.583
DRR006525Leaf Summer glycyrrhizin high producing strain7.464
DRR006526Leaf Summer glycyrrhizin high producing strain7.737

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.023
SRR2868004Drought Stress(Tissue:root)1.302
SRR2967015Control (Tissue:root)2.952

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.835
SRR9715740Leave6.469
SRR9715741Leave4.277
SRR9715739Root1.717
SRR9715742Root4.714
SRR9715743Root4.738

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.199
SRR8749028MeJA induced 9h25.597
SRR8749029MeJA induced 9h5.926
SRR8749030Uninduced1.098
SRR8749031Uninduced0.387
SRR8749032Uninduced0.696

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.596
SRR8400027Control-Root2.691

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved