Gene detail information of Glyur001994s00033877.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G26650.13.00E-100glyceraldehyde 3-phosphate dehydrogenase A subunit
NRAEH04452.17.90E-134glyceraldehyde-3-phosphate dehydrogenase [Arachis hypogaea]
COGNP_682256.19.00E-72glyceraldehyde-3-phosphate dehydrogenase [Thermosynechococcus elongatus BP-1]
Swissprottr|P09043|G3PA_TOBAC3.00E-128Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Precursor; Fragment)
trEMBLtr|F8UX79|F8UX79_ARAHY3.00E-134Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold019944919151143+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05298GAPA EC:1.2.1.13 Carbon metabolism map01200
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001994s00033877.1PF00044.19Gp_dh_N361861.90E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.056
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.665
DRR006520Root Summer glycyrrhizin high producing strain0.498
DRR006521Root Winter glycyrrhizin high producing strain0.604
DRR006522Root Winter glycyrrhizin high producing strain1.092
DRR006523Root Summer glycyrrhizin low producing strain0.512
DRR006524Root Summer glycyrrhizin low producing strain0.513
DRR006525Leaf Summer glycyrrhizin high producing strain2528.714
DRR006526Leaf Summer glycyrrhizin high producing strain2507.513

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.360
SRR2868004Drought Stress(Tissue:root)32.189
SRR2967015Control (Tissue:root)5.787

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1244.132
SRR9715740Leave1659.235
SRR9715741Leave1025.210
SRR9715739Root0.574
SRR9715742Root1.279
SRR9715743Root1.364

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.371
SRR8749028MeJA induced 9h9.628
SRR8749029MeJA induced 9h3.092
SRR8749030Uninduced1.351
SRR8749031Uninduced0.237
SRR8749032Uninduced3.087

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.675
SRR8400027Control-Root5.622

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved