Gene detail information of Glyur001996s00039763.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21760.1 | 2.00E-100 | UDP-Glycosyltransferase superfamily protein |
| NR | ADV71363.1 | 0 | glycosyltransferase GT03H24 [Pueraria montana var. lobata] |
| COG | YP_004967697.1 | 2.00E-06 | glycosyl transferase family protein [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|Q66PF3|UFOG3_FRAAN | 1.00E-135 | Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 {ECO:0000250|UniProtKB:Q2V6K0} |
| trEMBL | tr|E9M5E8|E9M5E8_PUEML | 0 | Glycosyltransferase GT03H24 {ECO:0000313|EMBL:ADV71363.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01996 | 44612 | 46021 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001996s00039763.1 | PF00201.13 | UDPGT | 264 | 409 | 1.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.489 |
| SRR1783600 | control | 9.776 |
| SRR1783602 | moderate drought stress | 4.482 |
| SRR1811619 | moderate drought stress | 4.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.074 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.844 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.180 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.606 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.999 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.213 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.802 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.532 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.001 |
| SRR2967015 | Control (Tissue:root) | 7.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.041 |
| SRR9715740 | Leave | 4.067 |
| SRR9715741 | Leave | 7.768 |
| SRR9715739 | Root | 14.130 |
| SRR9715742 | Root | 19.009 |
| SRR9715743 | Root | 14.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.048 |
| SRR8749028 | MeJA induced 9h | 1.013 |
| SRR8749029 | MeJA induced 9h | 0.312 |
| SRR8749030 | Uninduced | 0.540 |
| SRR8749031 | Uninduced | 0.217 |
| SRR8749032 | Uninduced | 0.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.947 |
| SRR8400027 | Control-Root | 6.541 |