Gene detail information of Glyur001997s00042115.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13910.1 | 6.00E-21 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004493337.1 | 7.10E-85 | PREDICTED: ethylene-responsive transcription factor LEP-like [Cicer arietinum] |
| Swissprot | tr|Q9M644|LEP_ARATH | 3.00E-41 | Ethylene-responsive transcription factor LEP |
| trEMBL | tr|A0A072U1G5|A0A072U1G5_MEDTR | 1.00E-70 | AP2 domain class transcription factor {ECO:0000313|EMBL:KEH23497.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01997 | 16376 | 17224 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001997s00042115.1 | PF00847.15 | AP2 | 41 | 90 | 1.10E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.043 |
| SRR1783600 | control | 0.043 |
| SRR1783602 | moderate drought stress | 0.179 |
| SRR1811619 | moderate drought stress | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.068 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.127 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.257 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.789 |
| SRR2967015 | Control (Tissue:root) | 0.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.219 |
| SRR9715743 | Root | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.485 |
| SRR8749028 | MeJA induced 9h | 0.079 |
| SRR8749029 | MeJA induced 9h | 0.072 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.394 |
| SRR8400027 | Control-Root | 0.241 |