Gene detail information of Glyur002009s00041783.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52560.17.00E-72ubiquitin E2 variant 1D-4
NRXP_006575294.16.07E-111PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like [Glycine max]
Swissprottr|Q9SVD7|UEV1D_ARATH2.00E-100Ubiquitin-conjugating enzyme E2 variant 1D
trEMBLtr|U5U2R1|U5U2R1_PHAVU6.00E-110Ubiquitin conjugating enzyme/ubiquitin-like activating enzyme {ECO:0000313|EMBL:AGZ15402.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0200964679898+


Gene family

Gene familysubfamily
Ubiquitin FamilyUBC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002009s00041783.2PF00179.21UQ_con381305.80E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control215.950
SRR1783600control216.701
SRR1783602moderate drought stress165.714
SRR1811619moderate drought stress164.954

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain259.987
DRR006520Root Summer glycyrrhizin high producing strain257.435
DRR006521Root Winter glycyrrhizin high producing strain245.562
DRR006522Root Winter glycyrrhizin high producing strain237.257
DRR006523Root Summer glycyrrhizin low producing strain245.870
DRR006524Root Summer glycyrrhizin low producing strain242.720
DRR006525Leaf Summer glycyrrhizin high producing strain116.683
DRR006526Leaf Summer glycyrrhizin high producing strain116.771

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)395.823
SRR2868004Drought Stress(Tissue:root)438.361
SRR2967015Control (Tissue:root)419.221

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave271.497
SRR9715740Leave270.441
SRR9715741Leave312.535
SRR9715739Root292.083
SRR9715742Root247.109
SRR9715743Root250.821

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h413.426
SRR8749028MeJA induced 9h331.990
SRR8749029MeJA induced 9h312.164
SRR8749030Uninduced254.224
SRR8749031Uninduced202.960
SRR8749032Uninduced244.069

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root374.548
SRR8400027Control-Root407.015

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved