Gene detail information of Glyur002012s00036493.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G25180.15.00E-105response regulator 12
NRKHN15214.10Two-component response regulator ARR12 [Glycine soja]
COGYP_002248567.13.00E-17FrgC protein [Thermodesulfovibrio yellowstonii DSM 11347]
Swissprottr|P62598|ARR12_ARATH3.00E-124Two-component response regulator ARR12
trEMBLtr|I1L2E2|I1L2E2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G14650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020123925460+


Gene family

Gene familysubfamily
Transcription Factors FamilyARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002012s00036493.1PF00072.19Response_reg261341.10E-21
Glyur002012s00036493.1PF00249.26Myb_DNA-binding2112611.30E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.703
SRR1783600control10.701
SRR1783602moderate drought stress17.417
SRR1811619moderate drought stress17.323

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.934
DRR006520Root Summer glycyrrhizin high producing strain13.897
DRR006521Root Winter glycyrrhizin high producing strain11.152
DRR006522Root Winter glycyrrhizin high producing strain10.839
DRR006523Root Summer glycyrrhizin low producing strain14.227
DRR006524Root Summer glycyrrhizin low producing strain14.242
DRR006525Leaf Summer glycyrrhizin high producing strain4.803
DRR006526Leaf Summer glycyrrhizin high producing strain4.825

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.047
SRR2868004Drought Stress(Tissue:root)30.804
SRR2967015Control (Tissue:root)33.091

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.374
SRR9715740Leave8.490
SRR9715741Leave9.297
SRR9715739Root14.275
SRR9715742Root17.536
SRR9715743Root16.296

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.300
SRR8749028MeJA induced 9h35.997
SRR8749029MeJA induced 9h18.704
SRR8749030Uninduced17.045
SRR8749031Uninduced7.329
SRR8749032Uninduced6.762

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.511
SRR8400027Control-Root24.609

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved