Gene detail information of Glyur002022s00030449.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26530.26.00E-166Aldolase superfamily protein
NRNP_001237315.10fructose-bisphosphate aldolase [Glycine max]
COGYP_002602040.14.00E-118hypothetical protein HRM2_07620 [Desulfobacterium autotrophicum HRM2]
Swissprottr|P46256|ALF1_PEA0Fructose-bisphosphate aldolase, cytoplasmic isozyme 1
trEMBLtr|Q6RUF6|Q6RUF6_SOYBN0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02022850711194+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002022s00030449.1PF00274.14Glycolytic113483.50E-164


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.209
SRR1783600control0.187
SRR1783602moderate drought stress0.215
SRR1811619moderate drought stress0.218

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.253
DRR006520Root Summer glycyrrhizin high producing strain0.218
DRR006521Root Winter glycyrrhizin high producing strain0.721
DRR006522Root Winter glycyrrhizin high producing strain0.659
DRR006523Root Summer glycyrrhizin low producing strain0.404
DRR006524Root Summer glycyrrhizin low producing strain0.346
DRR006525Leaf Summer glycyrrhizin high producing strain890.916
DRR006526Leaf Summer glycyrrhizin high producing strain886.786

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.227
SRR2868004Drought Stress(Tissue:root)0.240
SRR2967015Control (Tissue:root)0.097

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave221.607
SRR9715740Leave537.987
SRR9715741Leave139.348
SRR9715739Root0.026
SRR9715742Root0.337
SRR9715743Root0.148

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.104
SRR8749028MeJA induced 9h0.112
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.033
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.325
SRR8400027Control-Root0.465

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved