Gene detail information of Glyur002029s00034004.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28550.34.00E-111related to AP2.7
NRXP_006592243.10PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X3 [Glycine max]
Swissprottr|Q9SK03|RAP27_ARATH4.00E-125Ethylene-responsive transcription factor RAP2-7
trEMBLtr|K7LTI1|K7LTI1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G07800.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020292323127763-


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2
EAR motif-containing ProteinsAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002029s00034004.1PF00847.15AP21552042.00E-14
Glyur002029s00034004.1PF00847.15AP22472971.30E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.915
SRR1783600control38.966
SRR1783602moderate drought stress76.650
SRR1811619moderate drought stress76.215

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.114
DRR006520Root Summer glycyrrhizin high producing strain42.467
DRR006521Root Winter glycyrrhizin high producing strain28.321
DRR006522Root Winter glycyrrhizin high producing strain27.232
DRR006523Root Summer glycyrrhizin low producing strain25.733
DRR006524Root Summer glycyrrhizin low producing strain26.507
DRR006525Leaf Summer glycyrrhizin high producing strain35.421
DRR006526Leaf Summer glycyrrhizin high producing strain35.317

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.792
SRR2868004Drought Stress(Tissue:root)20.852
SRR2967015Control (Tissue:root)66.106

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave72.924
SRR9715740Leave74.135
SRR9715741Leave88.589
SRR9715739Root8.738
SRR9715742Root32.409
SRR9715743Root27.446

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.967
SRR8749028MeJA induced 9h13.053
SRR8749029MeJA induced 9h11.712
SRR8749030Uninduced17.527
SRR8749031Uninduced8.432
SRR8749032Uninduced9.100

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.202
SRR8400027Control-Root48.782

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved