Gene detail information of Glyur002038s00029105.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G55260.19.00E-176protein phosphatase X 2
NRXP_004491437.10PREDICTED: serine/threonine-protein phosphatase PP-X isozyme 2-like isoform X2 [Cicer arietinum]
COGYP_001541554.12.00E-41metallophosphoesterase [Caldivirga maquilingensis IC-167]
Swissprottr|P48528|PPX2_ARATH0Serine/threonine-protein phosphatase PP-X isozyme 2
trEMBLtr|V7BBV1|V7BBV1_PHAVU0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020382849032979+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15423PPP4C EC:3.1.3.16 Glucagon signaling pathway map04922


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002038s00029105.1PF00149.23Metallophos452386.70E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.541
SRR1783600control14.495
SRR1783602moderate drought stress16.664
SRR1811619moderate drought stress16.372

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.991
DRR006520Root Summer glycyrrhizin high producing strain19.422
DRR006521Root Winter glycyrrhizin high producing strain7.443
DRR006522Root Winter glycyrrhizin high producing strain6.869
DRR006523Root Summer glycyrrhizin low producing strain16.717
DRR006524Root Summer glycyrrhizin low producing strain17.433
DRR006525Leaf Summer glycyrrhizin high producing strain8.806
DRR006526Leaf Summer glycyrrhizin high producing strain8.928

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.752
SRR2868004Drought Stress(Tissue:root)26.213
SRR2967015Control (Tissue:root)25.237

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.586
SRR9715740Leave18.126
SRR9715741Leave21.117
SRR9715739Root11.164
SRR9715742Root19.426
SRR9715743Root14.350

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.288
SRR8749028MeJA induced 9h5.191
SRR8749029MeJA induced 9h5.866
SRR8749030Uninduced5.546
SRR8749031Uninduced1.727
SRR8749032Uninduced1.304

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.634
SRR8400027Control-Root27.424

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved