Gene detail information of Glyur002042s00040198.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G11300.17.00E-124protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
NRXP_011008144.10PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105113604 [Populus euphratica]
COGYP_001958461.18.00E-07hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9SXB4|Y1130_ARATH3.00E-133G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 (Precursor)
trEMBLtr|A0A072TZ10|A0A072TZ10_MEDTR0S-locus lectin kinase family protein {ECO:0000313|EMBL:KEH22677.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0204210338033-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002042s00040198.2PF01453.19B_lectin2333408.90E-28
Glyur002042s00040198.2PF00954.15S_locus_glycop3664761.20E-28
Glyur002042s00040198.2PF08276.6PAN_25095681.30E-13
Glyur002042s00040198.2PF07714.12Pkinase_Tyr6607432.90E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.825
SRR1783600control0.831
SRR1783602moderate drought stress0.559
SRR1811619moderate drought stress0.576

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.534
DRR006520Root Summer glycyrrhizin high producing strain0.514
DRR006521Root Winter glycyrrhizin high producing strain0.328
DRR006522Root Winter glycyrrhizin high producing strain0.317
DRR006523Root Summer glycyrrhizin low producing strain1.235
DRR006524Root Summer glycyrrhizin low producing strain1.271
DRR006525Leaf Summer glycyrrhizin high producing strain1.081
DRR006526Leaf Summer glycyrrhizin high producing strain1.066

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.100
SRR2868004Drought Stress(Tissue:root)1.264
SRR2967015Control (Tissue:root)0.931

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.931
SRR9715740Leave2.715
SRR9715741Leave2.809
SRR9715739Root0.142
SRR9715742Root0.522
SRR9715743Root0.442

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.494
SRR8749028MeJA induced 9h2.877
SRR8749029MeJA induced 9h2.065
SRR8749030Uninduced1.829
SRR8749031Uninduced3.020
SRR8749032Uninduced1.886

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.985
SRR8400027Control-Root1.212

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved