Gene detail information of Glyur002043s00033355.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24620.10phosphoglucose isomerase 1
NRXP_004490427.10PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic-like isoform X1 [Cicer arietinum]
COGYP_001867251.10glucose-6-phosphate isomerase [Nostoc punctiforme PCC 73102]
Swissprottr|Q8H103|G6PIP_ARATH0Glucose-6-phosphate isomerase 1, chloroplastic (Precursor)
trEMBLtr|G7KBI3|G7KBI3_MEDTR0Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02043233312752+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01810GPI, pgi EC:5.3.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006094  gluconeogenesis

GO:0006096  glycolytic process


molecular_function

GO:0004347  glucose-6-phosphate isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002043s00033355.1PF00342.14PGI1262132.10E-07
Glyur002043s00033355.1PF00342.14PGI2444133.60E-31
Glyur002043s00033355.1PF00342.14PGI4475055.50E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.873
SRR1783600control28.627
SRR1783602moderate drought stress30.960
SRR1811619moderate drought stress30.122

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.390
DRR006520Root Summer glycyrrhizin high producing strain29.674
DRR006521Root Winter glycyrrhizin high producing strain13.716
DRR006522Root Winter glycyrrhizin high producing strain13.217
DRR006523Root Summer glycyrrhizin low producing strain39.269
DRR006524Root Summer glycyrrhizin low producing strain39.330
DRR006525Leaf Summer glycyrrhizin high producing strain51.192
DRR006526Leaf Summer glycyrrhizin high producing strain52.269

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)106.136
SRR2868004Drought Stress(Tissue:root)103.400
SRR2967015Control (Tissue:root)92.993

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.816
SRR9715740Leave40.626
SRR9715741Leave58.632
SRR9715739Root26.288
SRR9715742Root50.204
SRR9715743Root44.933

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h42.445
SRR8749028MeJA induced 9h42.349
SRR8749029MeJA induced 9h32.519
SRR8749030Uninduced54.962
SRR8749031Uninduced44.253
SRR8749032Uninduced48.777

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.409
SRR8400027Control-Root69.129

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved