Gene detail information of Glyur002045s00039431.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G55610.20BRI1 like
NRXP_004499678.10PREDICTED: serine/threonine-protein kinase BRI1-like 1-like [Cicer arietinum]
COGYP_004775215.13.00E-41RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9ZWC8|BRL1_ARATH0Serine/threonine-protein kinase BRI1-like 1 (Precursor)
trEMBLtr|A0A072UTE9|A0A072UTE9_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH32872.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020452351527198-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002045s00039431.1PF08263.7LRRNT_251922.80E-06
Glyur002045s00039431.1PF13516.1LRR_61671821.7
Glyur002045s00039431.1PF13855.1LRR_82433023.00E-07
Glyur002045s00039431.1PF00560.28LRR_13193400.4
Glyur002045s00039431.1PF13855.1LRR_83684284.30E-08
Glyur002045s00039431.1PF00560.28LRR_14414610.12
Glyur002045s00039431.1PF13855.1LRR_85135749.20E-07
Glyur002045s00039431.1PF13516.1LRR_66096320.2
Glyur002045s00039431.1PF00560.28LRR_17057240.32
Glyur002045s00039431.1PF13855.1LRR_87277869.00E-10
Glyur002045s00039431.1PF00069.20Pkinase92611981.10E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.654
SRR1783600control15.594
SRR1783602moderate drought stress8.705
SRR1811619moderate drought stress8.541

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.879
DRR006520Root Summer glycyrrhizin high producing strain5.619
DRR006521Root Winter glycyrrhizin high producing strain2.177
DRR006522Root Winter glycyrrhizin high producing strain2.169
DRR006523Root Summer glycyrrhizin low producing strain6.362
DRR006524Root Summer glycyrrhizin low producing strain6.401
DRR006525Leaf Summer glycyrrhizin high producing strain1.261
DRR006526Leaf Summer glycyrrhizin high producing strain1.235

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.182
SRR2868004Drought Stress(Tissue:root)22.418
SRR2967015Control (Tissue:root)22.763

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.480
SRR9715740Leave3.897
SRR9715741Leave2.850
SRR9715739Root17.778
SRR9715742Root24.798
SRR9715743Root22.660

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.187
SRR8749028MeJA induced 9h60.361
SRR8749029MeJA induced 9h36.897
SRR8749030Uninduced16.690
SRR8749031Uninduced31.777
SRR8749032Uninduced28.013

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.146
SRR8400027Control-Root19.657

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved