Gene detail information of Glyur002047s00043657.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55700.1 | 5.00E-77 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003538437.1 | 1.99E-157 | PREDICTED: UDP-glycosyltransferase 76F1-like [Glycine max] |
| Swissprot | tr|Q9M052|U76F1_ARATH | 2.00E-91 | UDP-glycosyltransferase 76F1 |
| trEMBL | tr|I1LML6|I1LML6_SOYBN | 7.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02047 | 18699 | 21653 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002047s00043657.1 | PF00201.13 | UDPGT | 260 | 314 | 1.60E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.980 |
| SRR1783600 | control | 1.697 |
| SRR1783602 | moderate drought stress | 2.883 |
| SRR1811619 | moderate drought stress | 2.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.339 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.341 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.379 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.413 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.953 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.841 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.119 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.149 |
| SRR2967015 | Control (Tissue:root) | 0.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.004 |
| SRR9715740 | Leave | 6.672 |
| SRR9715741 | Leave | 4.005 |
| SRR9715739 | Root | 0.327 |
| SRR9715742 | Root | 1.078 |
| SRR9715743 | Root | 0.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.031 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.428 |
| SRR8400027 | Control-Root | 0.700 |