Gene detail information of Glyur002062s00040006.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54380.10protein kinase family protein
NRXP_003589835.10Kinase-like protein [Medicago truncatula]
COGYP_008151634.16.00E-20hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9LK35|THE1_ARATH0Receptor-like protein kinase THESEUS 1 (Precursor)
trEMBLtr|A0A072U1N9|A0A072U1N9_MEDTR0Receptor-like kinase, putative {ECO:0000313|EMBL:KEH19715.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0206242276577+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002062s00040006.1PF12819.2Malectin_like383821.90E-52
Glyur002062s00040006.1PF07714.12Pkinase_Tyr4866633.60E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.039
SRR1783600control0.055
SRR1783602moderate drought stress0.025
SRR1811619moderate drought stress0.010

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.595
DRR006520Root Summer glycyrrhizin high producing strain0.511
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.095
DRR006524Root Summer glycyrrhizin low producing strain0.105
DRR006525Leaf Summer glycyrrhizin high producing strain13.540
DRR006526Leaf Summer glycyrrhizin high producing strain13.334

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.209
SRR2868004Drought Stress(Tissue:root)2.986
SRR2967015Control (Tissue:root)1.622

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.103
SRR9715740Leave7.497
SRR9715741Leave8.157
SRR9715739Root0.051
SRR9715742Root0.073
SRR9715743Root0.144

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.638
SRR8749028MeJA induced 9h15.080
SRR8749029MeJA induced 9h2.600
SRR8749030Uninduced14.585
SRR8749031Uninduced9.248
SRR8749032Uninduced3.957

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.028
SRR8400027Control-Root0.046

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved