Gene detail information of Glyur002065s00035687.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31780.20monogalactosyl diacylglycerol synthase 1
NRXP_004498820.10PREDICTED: probable monogalactosyldiacylglycerol synthase, chloroplastic-like [Cicer arietinum]
COGYP_005440390.19.00E-107monogalactosyldiacylglycerol synthase family protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|Q9FZL4|MGDG_SOYBN0Probable monogalactosyldiacylglycerol synthase, chloroplastic (Precursor)
trEMBLtr|M5XC61|M5XC61_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ23504.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020652703931777+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT28


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03715E2.4.1.46 EC:2.4.1.46 Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0009247  glycolipid biosynthetic process

GO:0030259  lipid glycosylation


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002065s00035687.1PF06925.6MGDG_synth1523194.40E-60
Glyur002065s00035687.1PF04101.11Glyco_tran_28_C3654333.40E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.206
SRR1783600control15.156
SRR1783602moderate drought stress16.760
SRR1811619moderate drought stress16.960

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.372
DRR006520Root Summer glycyrrhizin high producing strain16.226
DRR006521Root Winter glycyrrhizin high producing strain33.277
DRR006522Root Winter glycyrrhizin high producing strain32.699
DRR006523Root Summer glycyrrhizin low producing strain20.503
DRR006524Root Summer glycyrrhizin low producing strain20.610
DRR006525Leaf Summer glycyrrhizin high producing strain29.462
DRR006526Leaf Summer glycyrrhizin high producing strain29.410

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.674
SRR2868004Drought Stress(Tissue:root)24.129
SRR2967015Control (Tissue:root)23.169

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave57.247
SRR9715740Leave63.347
SRR9715741Leave63.079
SRR9715739Root12.955
SRR9715742Root29.895
SRR9715743Root27.061

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.729
SRR8749028MeJA induced 9h7.283
SRR8749029MeJA induced 9h5.908
SRR8749030Uninduced4.365
SRR8749031Uninduced1.210
SRR8749032Uninduced2.147

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.035
SRR8400027Control-Root23.704

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved