Gene detail information of Glyur002066s00031965.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G62660.11.00E-154galacturonosyltransferase-like 7
NRXP_007145178.10hypothetical protein PHAVU_007G217100g [Phaseolus vulgaris]
COGYP_007062961.17.00E-22LPS:glycosyltransferase [Synechococcus sp. PCC 6312]
Swissprottr|Q8VYF4|GATL7_ARATH0Probable galacturonosyltransferase-like 7
trEMBLtr|V7BH60|V7BH60_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17172.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020664514046348-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002066s00031965.1PF01501.15Glyco_transf_81253801.20E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control101.217
SRR1783600control99.569
SRR1783602moderate drought stress89.613
SRR1811619moderate drought stress86.528

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.679
DRR006520Root Summer glycyrrhizin high producing strain34.240
DRR006521Root Winter glycyrrhizin high producing strain12.656
DRR006522Root Winter glycyrrhizin high producing strain11.663
DRR006523Root Summer glycyrrhizin low producing strain22.605
DRR006524Root Summer glycyrrhizin low producing strain22.339
DRR006525Leaf Summer glycyrrhizin high producing strain53.968
DRR006526Leaf Summer glycyrrhizin high producing strain53.986

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)78.339
SRR2868004Drought Stress(Tissue:root)58.842
SRR2967015Control (Tissue:root)45.672

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave109.993
SRR9715740Leave130.579
SRR9715741Leave72.224
SRR9715739Root120.667
SRR9715742Root58.695
SRR9715743Root77.190

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.016
SRR8749028MeJA induced 9h16.132
SRR8749029MeJA induced 9h18.587
SRR8749030Uninduced6.588
SRR8749031Uninduced3.415
SRR8749032Uninduced9.539

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.333
SRR8400027Control-Root73.793

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved