Gene detail information of Glyur002067s00038855.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31950.11.00E-57cytochrome P450, family 82, subfamily C, polypeptide 3
NRAES74584.27.89E-115cytochrome P450 family protein [Medicago truncatula]
COGYP_004303682.17.00E-28cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprottr|O49859|C82A4_SOYBN9.00E-108Cytochrome P450 82A4
trEMBLtr|G7KJF6|G7KJF6_MEDTR3.00E-115Cytochrome P450 family protein {ECO:0000313|EMBL:AES74584.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020673819850-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002067s00038855.1PF00067.17p45021821.30E-61
Glyur002067s00038855.1PF00067.17p4502513818.60E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.536
SRR1783600control0.498
SRR1783602moderate drought stress3.641
SRR1811619moderate drought stress3.585

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.145
DRR006520Root Summer glycyrrhizin high producing strain0.077
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.258
DRR006524Root Summer glycyrrhizin low producing strain0.274
DRR006525Leaf Summer glycyrrhizin high producing strain0.598
DRR006526Leaf Summer glycyrrhizin high producing strain0.537

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.877
SRR2868004Drought Stress(Tissue:root)2.555
SRR2967015Control (Tissue:root)2.127

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.235
SRR9715740Leave2.215
SRR9715741Leave25.991
SRR9715739Root0.215
SRR9715742Root0.356
SRR9715743Root0.697

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.017
SRR8749028MeJA induced 9h0.018
SRR8749029MeJA induced 9h0.012
SRR8749030Uninduced0.000
SRR8749031Uninduced0.078
SRR8749032Uninduced0.057

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.447
SRR8400027Control-Root2.025

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved