Gene detail information of Glyur002069s00039542.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G43670.1 | 2.00E-36 | Inositol monophosphatase family protein |
| NR | AFW81818.1 | 1.45E-49 | hypothetical protein ZEAMMB73_780929 [Zea mays] |
| COG | YP_003290494.1 | 4.00E-34 | inositol phosphatase/fructose-16-bisphosphatase [Rhodothermus marinus DSM 4252] |
| Swissprot | tr|Q9SDL8|F16P2_ORYCO | 1.00E-50 | Fructose-1,6-bisphosphatase, cytosolic |
| trEMBL | tr|K7V367|K7V367_MAIZE | 5.00E-50 | Uncharacterized protein {ECO:0000313|EMBL:AFW81818.1, ECO:0000313|EnsemblPlants:GRMZM2G322953_P05} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02069 | 26404 | 28535 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002069s00039542.1 | PF00316.15 | FBPase | 22 | 111 | 3.30E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.675 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.151 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.260 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.477 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.841 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.949 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.435 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.089 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.548 |
| SRR8400027 | Control-Root | 0.319 |