Gene detail

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Gene detail information of Glyur002081s00034190.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36750.1	7.00E-89	Quinone reductase family protein
NR	XP_003537894.1	4.74E-148	PREDICTED: minor allergen Alt a 7-like [Glycine max]
COG	YP_003689738.1	2.00E-58	flavoprotein WrbA [Desulfurivibrio alkaliphilus AHT2]
Swissprot	tr\|O23207\|FQRL2_ARATH	3.00E-120	Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 {ECO:0000305}
trEMBL	tr\|I1LJG3\|I1LJG3_SOYBN	2.00E-148	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G12790.1}

Sequence

Transcript Sequence

>Glyur002081s00034190.1
AATCCATCTTATCTTAATAGTTAAAACAGCTCATATACATGACTAAGTGAAGTCTAATCCAAACTTCTTCACGTTACAATGGTTTCCACCTCTCTGCCTTTTCAAAGCATATAATCCAAAGTTTCAGAACCAACAACATTTGATTCACAACATTAATCATTTTCTGCTCGTCCTTGTACCTTGTTTTGCAAGAAAGACTAATAATTGCCTTATTAGTGAACCTTTTTAGAAACTATATATCTTAGCAGATATATTTGACCAGTTTGGATTAATTTCAATGGGGAAAGGAGGTGGTTGCATACCAAGCAAGAAAAAGTTACCAATTTCAGACCCAGAAAAGGATGAACCACTTATTAGTGCTGAAAGCCAAATAATCCCAAAGAATGAAACAACAAGTACAAGCCAATTAGAGGGGCAAAGGGAACTACTACCCCAAGAAGTGGTGAAAAAGCTGAAAGTTTACATTGTGTTCTACTCAATGTATGGACATGTTGAGTCATTGGCGAGATCCGTGAAGAAAGGGGTTGATTCCATTGATGGGGTTGAAGGGGTGTTGTACCGTGTGATGGAGACACTTCCCAATGAGGTCTTGCAACTGATGAAGGCACCTGAGAAGGGTAATGATCAGGTGCCACTGATATCTGCAGAGGAATTGGTGGAAGCTGATGGGGTGTTATTTGGCTTCCCAACAAGGTATGGAAGCATGGCGGCGCAGATGAAGGCGTTTTTCGATTCGACAGGTCAGTTGTGGAGGGAGCAGAAGCTGGCTGGTGTTCCTGCTGGCTTCTTTGTCAGTACTGGCACTCAGGGTGGTGGCCAAGAAACCACAGCTTGGACAGCAATCACACAGTTAGTCCACCATGGGATGCTCTATGTTCCTATTGGTTATACTTTTGGTGCTGGAATGTTTGAAATGGACTCCATTAGAGGTGGATCTCCATATGGTGCTGGAGTCTTTGCTGGCGATGGATCAAGGCAAGCAAGTGAAACAGAGCTGGCACTTGCTGAGTATCAAGGCAAGTACATGGCTACAATAGTCAAAAAGTTGGGACAGAAAAGCTAGCTAGTTTCTATCAAATCCTCACTTAAGTGCTGCTGCTAAGTACTAGCTTTCTAGTCTATCCCAACAGCTCAAAACTTAAATTCAATGTTGTGATTATATTTCAAATGTTGTGTTTGTTATTGGTGAATTGGTCTAAGATTGGCATGATCATGAACCTTG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02081	42981	44979	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K03809	wrbA	EC:1.6.5.2	Ubiquinone and other terpenoid-quinone biosynthesis	map00130

Gene Ontology

biological_process
GO:0045892 negative regulation of transcription, DNA-templated

molecular_function GO:0010181 FMN binding GO:0016491 oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002081s00034190.1	PF03358.10	FMN_red	115	202	1.30E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.462
SRR1783600	control	4.482
SRR1783602	moderate drought stress	3.174
SRR1811619	moderate drought stress	3.142

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.679
DRR006520	Root Summer glycyrrhizin high producing strain	6.418
DRR006521	Root Winter glycyrrhizin high producing strain	0.822
DRR006522	Root Winter glycyrrhizin high producing strain	0.795
DRR006523	Root Summer glycyrrhizin low producing strain	16.079
DRR006524	Root Summer glycyrrhizin low producing strain	16.047
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.427
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.530

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	25.180
SRR2868004	Drought Stress(Tissue:root)	47.137
SRR2967015	Control (Tissue:root)	30.485

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.164
SRR9715740	Leave	0.207
SRR9715741	Leave	0.211
SRR9715739	Root	1.243
SRR9715742	Root	2.887
SRR9715743	Root	2.840

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	37.912
SRR8749028	MeJA induced 9h	64.290
SRR8749029	MeJA induced 9h	40.406
SRR8749030	Uninduced	78.639
SRR8749031	Uninduced	35.017
SRR8749032	Uninduced	14.784

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	6.176
SRR8400027	Control-Root	6.804