Gene detail information of Glyur002082s00036166.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G02570.12.00E-151Mannose-6-phosphate isomerase, type I
NRXP_003541320.10PREDICTED: mannose-6-phosphate isomerase 1 [Glycine max]
COGYP_003201619.15.00E-49mannose-6-phosphate isomerase [Nakamurella multipartita DSM 44233]
Swissprottr|Q9M884|MPI1_ARATH0Mannose-6-phosphate isomerase 1
trEMBLtr|I1LX30|I1LX30_SOYBN0Mannose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000611}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold020822486130285+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01809manA, MPI EC:5.3.1.8 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0009298  GDP-mannose biosynthetic process


molecular_function

GO:0004476  mannose-6-phosphate isomerase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002082s00036166.1PF01238.16PMI_typeI133934.00E-106


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.216
SRR1783600control0.218
SRR1783602moderate drought stress0.546
SRR1811619moderate drought stress0.533

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.965
DRR006520Root Summer glycyrrhizin high producing strain0.800
DRR006521Root Winter glycyrrhizin high producing strain4.875
DRR006522Root Winter glycyrrhizin high producing strain4.368
DRR006523Root Summer glycyrrhizin low producing strain0.245
DRR006524Root Summer glycyrrhizin low producing strain0.348
DRR006525Leaf Summer glycyrrhizin high producing strain0.345
DRR006526Leaf Summer glycyrrhizin high producing strain0.301

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.186
SRR2868004Drought Stress(Tissue:root)0.547
SRR2967015Control (Tissue:root)0.159

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.367
SRR9715740Leave0.280
SRR9715741Leave0.384
SRR9715739Root0.849
SRR9715742Root0.556
SRR9715743Root0.274

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.857
SRR8749028MeJA induced 9h26.062
SRR8749029MeJA induced 9h22.040
SRR8749030Uninduced44.535
SRR8749031Uninduced71.410
SRR8749032Uninduced46.789

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.068
SRR8400027Control-Root0.291

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved