Gene detail information of Glyur002083s00039559.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23260.1 | 1.00E-67 | UDP-glucosyl transferase 84B1 |
| NR | XP_003536615.2 | 3.58E-142 | PREDICTED: UDP-glycosyltransferase 84B1-like [Glycine max] |
| COG | YP_004958904.1 | 1.00E-08 | MGT family glycosyltransferase [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|O22182|U84B1_ARATH | 3.00E-80 | UDP-glycosyltransferase 84B1 |
| trEMBL | tr|I1LEK0|I1LEK0_SOYBN | 1.00E-142 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G40900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02083 | 26183 | 28615 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002083s00039559.1 | PF00201.13 | UDPGT | 95 | 242 | 2.50E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.458 |
| SRR1783600 | control | 1.490 |
| SRR1783602 | moderate drought stress | 4.735 |
| SRR1811619 | moderate drought stress | 4.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.488 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.057 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.683 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.694 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.619 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.850 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.851 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.888 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.686 |
| SRR2967015 | Control (Tissue:root) | 8.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.203 |
| SRR9715740 | Leave | 32.153 |
| SRR9715741 | Leave | 18.595 |
| SRR9715739 | Root | 8.636 |
| SRR9715742 | Root | 5.388 |
| SRR9715743 | Root | 7.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.207 |
| SRR8749028 | MeJA induced 9h | 3.988 |
| SRR8749029 | MeJA induced 9h | 11.167 |
| SRR8749030 | Uninduced | 18.217 |
| SRR8749031 | Uninduced | 18.281 |
| SRR8749032 | Uninduced | 33.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.618 |
| SRR8400027 | Control-Root | 6.849 |