Gene detail information of Glyur002090s00035436.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73450.13.00E-31Protein kinase superfamily protein
NRXP_008460123.15.29E-36PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 3-like isoform X3 [Cucumis melo]
trEMBLtr|A0A072TFB0|A0A072TFB0_MEDTR9.00E-36Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH16067.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0209041096052+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002090s00035436.1PF00069.20Pkinase52916.70E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.409
SRR1783600control16.188
SRR1783602moderate drought stress14.770
SRR1811619moderate drought stress16.325

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.107
DRR006520Root Summer glycyrrhizin high producing strain10.906
DRR006521Root Winter glycyrrhizin high producing strain8.646
DRR006522Root Winter glycyrrhizin high producing strain9.634
DRR006523Root Summer glycyrrhizin low producing strain8.625
DRR006524Root Summer glycyrrhizin low producing strain12.017
DRR006525Leaf Summer glycyrrhizin high producing strain3.953
DRR006526Leaf Summer glycyrrhizin high producing strain4.433

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.319
SRR2868004Drought Stress(Tissue:root)3.582
SRR2967015Control (Tissue:root)2.982

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.808
SRR9715740Leave3.086
SRR9715741Leave3.291
SRR9715739Root0.667
SRR9715742Root4.218
SRR9715743Root2.783

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.578
SRR8749028MeJA induced 9h2.475
SRR8749029MeJA induced 9h4.132
SRR8749030Uninduced3.329
SRR8749031Uninduced3.066
SRR8749032Uninduced6.164

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.172
SRR8400027Control-Root4.699

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved