Gene detail information of Glyur002095s00044663.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26330.1 | 3.00E-71 | cytochrome P450, family 71, subfamily B, polypeptide 37 |
| NR | ABC59082.1 | 3.38E-172 | cytochrome P450 monooxygenase CYP83E8 [Medicago truncatula] |
| COG | YP_003301294.1 | 1.00E-27 | cytochrome P450 [Thermomonospora curvata DSM 43183] |
| Swissprot | tr|O65782|C83B1_ARATH | 3.00E-105 | Cytochrome P450 83B1 |
| trEMBL | tr|Q2MJ14|Q2MJ14_MEDTR | 1.00E-172 | Cytochrome P450 monooxygenase CYP83E8 {ECO:0000313|EMBL:ABC59082.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02095 | 5115 | 7418 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B37 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002095s00044663.1 | PF00067.17 | p450 | 1 | 113 | 2.60E-08 |
| Glyur002095s00044663.1 | PF00067.17 | p450 | 111 | 305 | 1.10E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.618 |
| SRR1783600 | control | 0.359 |
| SRR1783602 | moderate drought stress | 0.609 |
| SRR1811619 | moderate drought stress | 0.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.029 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.308 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.072 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.234 |
| SRR9715743 | Root | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.436 |
| SRR8400027 | Control-Root | 0.354 |