Gene detail information of Glyur002098s00031931.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G35040.15.00E-180AICARFT/IMPCHase bienzyme family protein
NRAET00779.20aicarft/IMPCHase bienzyme family protein [Medicago truncatula]
COGYP_003759034.12.00E-102phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Dehalogenimonas lykanthroporepellens BL-DC-9]
trEMBLtr|G7KEF8|G7KEF8_MEDTR0Aicarft/IMPCHase bienzyme family protein {ECO:0000313|EMBL:AET00779.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02098639210734-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00602purH EC:2.1.2.3 3.5.4.10 Purine metabolism map00230
One carbon pool by folatemap00670
Antifolate resistancemap01523


Gene Ontology

biological_process

GO:0006164  purine nucleotide biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0003937  IMP cyclohydrolase activity

GO:0004643  phosphoribosylaminoimidazolecarboxamide formyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002098s00031931.1PF02142.17MGS1321.80E-06
Glyur002098s00031931.1PF01808.13AICARFT_IMPCHas533161.50E-104


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.753
SRR1783600control10.887
SRR1783602moderate drought stress12.721
SRR1811619moderate drought stress12.126

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.653
DRR006520Root Summer glycyrrhizin high producing strain28.728
DRR006521Root Winter glycyrrhizin high producing strain7.632
DRR006522Root Winter glycyrrhizin high producing strain7.612
DRR006523Root Summer glycyrrhizin low producing strain33.185
DRR006524Root Summer glycyrrhizin low producing strain34.023
DRR006525Leaf Summer glycyrrhizin high producing strain15.381
DRR006526Leaf Summer glycyrrhizin high producing strain15.709

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.445
SRR2868004Drought Stress(Tissue:root)32.816
SRR2967015Control (Tissue:root)36.412

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.387
SRR9715740Leave21.145
SRR9715741Leave17.863
SRR9715739Root25.414
SRR9715742Root28.197
SRR9715743Root33.376

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.493
SRR8749028MeJA induced 9h22.136
SRR8749029MeJA induced 9h28.547
SRR8749030Uninduced14.594
SRR8749031Uninduced5.244
SRR8749032Uninduced15.223

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.763
SRR8400027Control-Root33.586

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved