Gene detail information of Glyur002110s00041482.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G59640.1 | 2.00E-65 | BIG PETAL P |
| NR | XP_004509918.1 | 8.53E-118 | PREDICTED: transcription factor bHLH79-like [Cicer arietinum] |
| Swissprot | tr|Q9LV17|BH079_ARATH | 5.00E-63 | Transcription factor bHLH79 |
| trEMBL | tr|G7LEL6|G7LEL6_MEDTR | 8.00E-118 | Transcription factor {ECO:0000313|EMBL:AET03061.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02110 | 37755 | 42866 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002110s00041482.1 | PF00010.21 | HLH | 135 | 182 | 2.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.535 |
| SRR1783600 | control | 0.506 |
| SRR1783602 | moderate drought stress | 0.563 |
| SRR1811619 | moderate drought stress | 0.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.736 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.293 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.306 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.769 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.485 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.986 |
| SRR2967015 | Control (Tissue:root) | 5.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.588 |
| SRR9715740 | Leave | 2.109 |
| SRR9715741 | Leave | 5.136 |
| SRR9715739 | Root | 0.511 |
| SRR9715742 | Root | 0.992 |
| SRR9715743 | Root | 1.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.162 |
| SRR8749028 | MeJA induced 9h | 4.140 |
| SRR8749029 | MeJA induced 9h | 4.860 |
| SRR8749030 | Uninduced | 2.604 |
| SRR8749031 | Uninduced | 0.653 |
| SRR8749032 | Uninduced | 1.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.743 |
| SRR8400027 | Control-Root | 3.228 |