Gene detail information of Glyur002121s00033328.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G09970.13.00E-172cytochrome P450, family 78, subfamily A, polypeptide 7
NRKEH43601.10cytochrome P450 family 78 protein [Medicago truncatula]
COGNP_241445.12.00E-25cytochrome P450 hydroxylase [Bacillus halodurans C-125]
Swissprottr|Q9FIB0|C78A7_ARATH0Cytochrome P450 78A7
trEMBLtr|A0A072VPL1|A0A072VPL1_MEDTR0Cytochrome P450 family 78 protein {ECO:0000313|EMBL:KEH43601.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold021215477803+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP78A7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002121s00033328.1PF00067.17p450101939.10E-65
Glyur002121s00033328.1PF00067.17p4502697176.30E-77


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.298
SRR1783600control5.263
SRR1783602moderate drought stress5.207
SRR1811619moderate drought stress5.269

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.563
DRR006520Root Summer glycyrrhizin high producing strain3.902
DRR006521Root Winter glycyrrhizin high producing strain1.768
DRR006522Root Winter glycyrrhizin high producing strain1.720
DRR006523Root Summer glycyrrhizin low producing strain1.374
DRR006524Root Summer glycyrrhizin low producing strain1.282
DRR006525Leaf Summer glycyrrhizin high producing strain0.144
DRR006526Leaf Summer glycyrrhizin high producing strain0.175

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.193
SRR2868004Drought Stress(Tissue:root)7.353
SRR2967015Control (Tissue:root)5.965

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.195
SRR9715740Leave0.137
SRR9715741Leave0.189
SRR9715739Root12.307
SRR9715742Root6.734
SRR9715743Root7.698

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.925
SRR8749028MeJA induced 9h1.042
SRR8749029MeJA induced 9h0.707
SRR8749030Uninduced0.769
SRR8749031Uninduced0.399
SRR8749032Uninduced1.252

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.706
SRR8400027Control-Root4.692

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved