Gene detail information of Glyur002123s00028288.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G55130.11.00E-169co-factor for nitrate, reductase and xanthine dehydrogenase 5
NRXP_004491427.10PREDICTED: adenylyltransferase and sulfurtransferase MOCS3-like [Cicer arietinum]
COGYP_001939307.15.00E-106Bifunctional enzyme, contains ThiF/HesB family NAD/FAD binding and Rhodanese similarity domains [Methylacidiphilum infernorum V4]
Swissprottr|Q9ZNW0|MOCS3_ARATH0Molybdopterin-synthase sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_03049}
trEMBLtr|V7B929|V7B929_PHAVU0Adenylyltransferase and sulfurtransferase MOCS3 {ECO:0000256|HAMAP-Rule:MF_03049}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02123780513562+


Gene family

Gene familysubfamily
Ubiquitin FamilyThiF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11996MOCS3, UBA4 EC:2.7.7.80 2.8.1.11 Sulfur relay system map04122


Gene Ontology

biological_process

GO:0002143  tRNA wobble position uridine thiolation


cellular_component

GO:0005829  cytosol


molecular_function

GO:0004792  thiosulfate sulfurtransferase activity

GO:0008641  small protein activating enzyme activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002123s00028288.1PF00899.16ThiF822132.60E-40
Glyur002123s00028288.1PF05237.8MoeZ_MoeB2193036.80E-32
Glyur002123s00028288.1PF00581.15Rhodanese3434474.30E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.853
SRR1783600control37.214
SRR1783602moderate drought stress37.908
SRR1811619moderate drought stress37.415

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.063
DRR006520Root Summer glycyrrhizin high producing strain33.972
DRR006521Root Winter glycyrrhizin high producing strain19.043
DRR006522Root Winter glycyrrhizin high producing strain18.183
DRR006523Root Summer glycyrrhizin low producing strain28.709
DRR006524Root Summer glycyrrhizin low producing strain28.409
DRR006525Leaf Summer glycyrrhizin high producing strain17.815
DRR006526Leaf Summer glycyrrhizin high producing strain17.019

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.759
SRR2868004Drought Stress(Tissue:root)40.493
SRR2967015Control (Tissue:root)42.159

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.468
SRR9715740Leave23.991
SRR9715741Leave29.116
SRR9715739Root28.106
SRR9715742Root32.221
SRR9715743Root27.322

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.648
SRR8749028MeJA induced 9h25.657
SRR8749029MeJA induced 9h19.634
SRR8749030Uninduced6.360
SRR8749031Uninduced2.798
SRR8749032Uninduced5.034

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.032
SRR8400027Control-Root36.963

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved