Gene detail information of Glyur002126s00036417.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23240.11.00E-51ethylene response factor 1
NRXP_004497839.12.64E-100PREDICTED: ethylene-responsive transcription factor 1B-like [Cicer arietinum]
Swissprottr|Q8LDC8|ERF92_ARATH2.00E-76Ethylene-responsive transcription factor 1B
trEMBLtr|G7I5D9|G7I5D9_MEDTR1.00E-88Ethylene-responsive transcription factor 1B {ECO:0000313|EMBL:AES60299.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold021263698537659-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002126s00036417.1PF00847.15AP2841343.20E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.902
SRR1783600control4.958
SRR1783602moderate drought stress4.381
SRR1811619moderate drought stress4.223

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.966
DRR006520Root Summer glycyrrhizin high producing strain0.938
DRR006521Root Winter glycyrrhizin high producing strain47.629
DRR006522Root Winter glycyrrhizin high producing strain46.886
DRR006523Root Summer glycyrrhizin low producing strain5.191
DRR006524Root Summer glycyrrhizin low producing strain5.317
DRR006525Leaf Summer glycyrrhizin high producing strain3.350
DRR006526Leaf Summer glycyrrhizin high producing strain3.150

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.799
SRR2868004Drought Stress(Tissue:root)5.303
SRR2967015Control (Tissue:root)0.729

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.042
SRR9715740Leave1.194
SRR9715741Leave1.677
SRR9715739Root2.742
SRR9715742Root2.332
SRR9715743Root1.218

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.072
SRR8749028MeJA induced 9h205.889
SRR8749029MeJA induced 9h110.876
SRR8749030Uninduced133.417
SRR8749031Uninduced232.853
SRR8749032Uninduced372.344

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.997
SRR8400027Control-Root2.086

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved