Gene detail information of Glyur002132s00041814.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01540.1 | 3.00E-23 | Protein kinase superfamily protein |
| NR | XP_007135125.1 | 8.77E-28 | hypothetical protein PHAVU_010G103100g [Phaseolus vulgaris] |
| Swissprot | tr|Q3EDL4|Y1154_ARATH | 3.00E-27 | Probable serine/threonine-protein kinase At1g01540 |
| trEMBL | tr|V7ANG5|V7ANG5_PHAVU | 3.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:ESW07119.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02132 | 17343 | 18886 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.6.3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002132s00041814.1 | PF07714.12 | Pkinase_Tyr | 10 | 62 | 2.30E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.840 |
| SRR1783600 | control | 35.792 |
| SRR1783602 | moderate drought stress | 53.229 |
| SRR1811619 | moderate drought stress | 53.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.857 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.784 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.477 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.258 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.534 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.535 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.194 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.022 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.639 |
| SRR9715740 | Leave | 5.170 |
| SRR9715741 | Leave | 4.317 |
| SRR9715739 | Root | 3.479 |
| SRR9715742 | Root | 5.359 |
| SRR9715743 | Root | 5.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 20.061 |
| SRR8400027 | Control-Root | 19.759 |