Gene detail information of Glyur002140s00029377.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G31860.16.00E-104histidine biosynthesis bifunctional protein (HISIE)
NRXP_004493105.10PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic-like isoform X2 [Cicer arietinum]
COGYP_001357554.17.00E-45histidine biosynthesis bifunctional protein HisI [Sulfurovum sp. NBC37-1]
Swissprottr|O82768|HIS2_ARATH1.00E-129Phosphoribosyl-ATP pyrophosphatase (Precursor)
trEMBLtr|A0A072U2X9|A0A072U2X9_MEDTR0Histidine biosynthesis hisIE protein {ECO:0000313|EMBL:KEH23503.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold021404197446031-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11755hisIE EC:3.6.1.31 3.5.4.19 Biosynthesis of amino acids map01230
Histidine metabolismmap00340


Gene Ontology

biological_process

GO:0000105  histidine biosynthetic process


molecular_function

GO:0004635  phosphoribosyl-AMP cyclohydrolase activity

GO:0004636  phosphoribosyl-ATP diphosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002140s00029377.1PF01502.13PRA-CH781516.70E-29
Glyur002140s00029377.1PF01503.12PRA-PH2042634.00E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.437
SRR1783600control30.457
SRR1783602moderate drought stress41.298
SRR1811619moderate drought stress40.898

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.246
DRR006520Root Summer glycyrrhizin high producing strain40.645
DRR006521Root Winter glycyrrhizin high producing strain27.936
DRR006522Root Winter glycyrrhizin high producing strain27.295
DRR006523Root Summer glycyrrhizin low producing strain27.704
DRR006524Root Summer glycyrrhizin low producing strain27.568
DRR006525Leaf Summer glycyrrhizin high producing strain30.415
DRR006526Leaf Summer glycyrrhizin high producing strain30.309

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.351
SRR2868004Drought Stress(Tissue:root)27.282
SRR2967015Control (Tissue:root)25.704

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.897
SRR9715740Leave35.383
SRR9715741Leave30.591
SRR9715739Root13.879
SRR9715742Root26.181
SRR9715743Root21.109

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.229
SRR8749028MeJA induced 9h20.122
SRR8749029MeJA induced 9h41.654
SRR8749030Uninduced21.698
SRR8749031Uninduced23.300
SRR8749032Uninduced31.944

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.416
SRR8400027Control-Root43.233

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved