Gene detail information of Glyur002146s00039025.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37730.1 | 3.00E-136 | Protein of unknown function (DUF604) |
| NR | XP_004492173.1 | 0 | PREDICTED: uncharacterized protein LOC101494656 [Cicer arietinum] |
| trEMBL | tr|A0A072U016|A0A072U016_MEDTR | 0 | Transferring glycosyl group transferase {ECO:0000313|EMBL:KEH22967.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02146 | 28650 | 31386 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002146s00039025.1 | PF04646.7 | DUF604 | 261 | 490 | 3.70E-91 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.935 |
| SRR1783600 | control | 0.742 |
| SRR1783602 | moderate drought stress | 0.462 |
| SRR1811619 | moderate drought stress | 0.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.487 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.584 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.252 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.248 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.236 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.915 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.282 |
| SRR2967015 | Control (Tissue:root) | 0.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.200 |
| SRR9715740 | Leave | 0.025 |
| SRR9715741 | Leave | 0.190 |
| SRR9715739 | Root | 1.736 |
| SRR9715742 | Root | 3.057 |
| SRR9715743 | Root | 2.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.599 |
| SRR8749028 | MeJA induced 9h | 0.251 |
| SRR8749029 | MeJA induced 9h | 0.095 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.051 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.188 |
| SRR8400027 | Control-Root | 1.834 |