Gene detail information of Glyur002155s00036300.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24590.1 | 8.00E-11 | DORNROSCHEN-like |
| NR | XP_003613106.1 | 8.09E-93 | AP2/ERF domain-containing transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9FYK5|ESR2_ARATH | 7.00E-36 | Ethylene-responsive transcription factor ESR2 |
| trEMBL | tr|G7JXS9|G7JXS9_MEDTR | 3.00E-93 | AP2 domain class transcription factor {ECO:0000313|EMBL:AES96064.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02155 | 42333 | 43547 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002155s00036300.1 | PF00847.15 | AP2 | 49 | 98 | 4.30E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.032 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.012 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.486 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.119 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.331 |
| SRR9715743 | Root | 0.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.863 |
| SRR8749028 | MeJA induced 9h | 1.947 |
| SRR8749029 | MeJA induced 9h | 10.334 |
| SRR8749030 | Uninduced | 0.871 |
| SRR8749031 | Uninduced | 1.715 |
| SRR8749032 | Uninduced | 4.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.103 |
| SRR8400027 | Control-Root | 0.323 |