Gene detail information of Glyur002157s00034193.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24490.1 | 7.00E-67 | Alcohol dehydrogenase transcription factor Myb/SANT-like family protein |
| NR | XP_004512963.1 | 1.58E-158 | PREDICTED: probable serine/threonine-protein kinase kinX-like [Cicer arietinum] |
| Swissprot | tr|Q9LJG8|ASIL2_ARATH | 2.00E-19 | Trihelix transcription factor ASIL2 {ECO:0000305} |
| trEMBL | tr|K7LER4|K7LER4_SOYBN | 2.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32130.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02157 | 8502 | 9641 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002157s00034193.1 | PF13837.1 | Myb_DNA-bind_4 | 128 | 218 | 1.80E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.998 |
| SRR1783600 | control | 29.294 |
| SRR1783602 | moderate drought stress | 32.243 |
| SRR1811619 | moderate drought stress | 32.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.636 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.446 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 61.166 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 59.950 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.114 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.040 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.525 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.919 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.199 |
| SRR2967015 | Control (Tissue:root) | 35.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 25.752 |
| SRR9715740 | Leave | 36.836 |
| SRR9715741 | Leave | 41.593 |
| SRR9715739 | Root | 17.713 |
| SRR9715742 | Root | 34.370 |
| SRR9715743 | Root | 28.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.655 |
| SRR8749028 | MeJA induced 9h | 44.691 |
| SRR8749029 | MeJA induced 9h | 35.762 |
| SRR8749030 | Uninduced | 21.934 |
| SRR8749031 | Uninduced | 38.213 |
| SRR8749032 | Uninduced | 33.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 38.979 |
| SRR8400027 | Control-Root | 32.424 |