Gene detail information of Glyur002157s00034199.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24503.10aldehyde dehydrogenase 2C4
NRXP_003528912.10PREDICTED: aldehyde dehydrogenase family 2 member C4-like isoform X1 [Glycine max]
COGYP_007058635.10NAD-dependent aldehyde dehydrogenase [Rivularia sp. PCC 7116]
Swissprottr|Q56YU0|AL2C4_ARATH0Aldehyde dehydrogenase family 2 member C4
trEMBLtr|I1KIS3|I1KIS3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G09640.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold021573833346300-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12355REF1 EC:1.2.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002157s00034199.1PF00171.17Aldedh304913.40E-177


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.519
SRR1783600control4.544
SRR1783602moderate drought stress4.297
SRR1811619moderate drought stress4.391

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.155
DRR006520Root Summer glycyrrhizin high producing strain2.246
DRR006521Root Winter glycyrrhizin high producing strain0.671
DRR006522Root Winter glycyrrhizin high producing strain0.584
DRR006523Root Summer glycyrrhizin low producing strain1.157
DRR006524Root Summer glycyrrhizin low producing strain1.135
DRR006525Leaf Summer glycyrrhizin high producing strain39.658
DRR006526Leaf Summer glycyrrhizin high producing strain39.301

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)151.212
SRR2868004Drought Stress(Tissue:root)207.053
SRR2967015Control (Tissue:root)134.870

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave38.792
SRR9715740Leave41.818
SRR9715741Leave35.306
SRR9715739Root13.832
SRR9715742Root13.242
SRR9715743Root14.687

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.292
SRR8749028MeJA induced 9h54.311
SRR8749029MeJA induced 9h72.495
SRR8749030Uninduced132.713
SRR8749031Uninduced208.991
SRR8749032Uninduced112.537

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root63.057
SRR8400027Control-Root48.341

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved