Gene detail information of Glyur002161s00032826.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53910.22.00E-53related to AP2 12
NRXP_004510558.11.16E-180PREDICTED: ethylene-responsive transcription factor RAP2-12-like isoform X1 [Cicer arietinum]
Swissprottr|Q9SSA8|RA212_ARATH9.00E-66Ethylene-responsive transcription factor RAP2-12
trEMBLtr|Q7XAU4|Q7XAU4_SOYBN0Ethylene responsive protein {ECO:0000313|EMBL:AAQ10777.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0216129155889+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002161s00032826.1PF00847.15AP21201691.00E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control406.508
SRR1783600control408.230
SRR1783602moderate drought stress359.391
SRR1811619moderate drought stress356.196

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain288.611
DRR006520Root Summer glycyrrhizin high producing strain285.904
DRR006521Root Winter glycyrrhizin high producing strain582.149
DRR006522Root Winter glycyrrhizin high producing strain566.186
DRR006523Root Summer glycyrrhizin low producing strain299.638
DRR006524Root Summer glycyrrhizin low producing strain300.182
DRR006525Leaf Summer glycyrrhizin high producing strain151.595
DRR006526Leaf Summer glycyrrhizin high producing strain150.900

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)488.690
SRR2868004Drought Stress(Tissue:root)730.133
SRR2967015Control (Tissue:root)1017.857

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave396.109
SRR9715740Leave386.351
SRR9715741Leave513.765
SRR9715739Root807.800
SRR9715742Root806.940
SRR9715743Root801.887

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h173.275
SRR8749028MeJA induced 9h393.373
SRR8749029MeJA induced 9h170.430
SRR8749030Uninduced417.481
SRR8749031Uninduced168.805
SRR8749032Uninduced187.905

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root642.273
SRR8400027Control-Root640.361

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved