Gene detail

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Gene detail information of Glyur002163s00037008.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G41040.1	2.00E-173	HXXXD-type acyl-transferase family protein
NR	XP_003549071.1	0	PREDICTED: omega-hydroxypalmitate O-feruloyl transferase-like [Glycine max]
Swissprot	tr\|Q94CD1\|HHT1_ARATH	0	Omega-hydroxypalmitate O-feruloyl transferase
trEMBL	tr\|K7MFB9\|K7MFB9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G05770.2}

Sequence

Transcript Sequence

>Glyur002163s00037008.1
ATGGAAAAGATTAGTGAAAACGGTTTCCAACTGAGTGTAAAGCTAAGTGAACCAACACTAGTTCCTCCAGCAGAAGAGACCAAGAGGGGCATGTACTTCCTGTCCAACCTTGACCAGAACATTGCAGTGATAGTTAGAACTGTTTACTGCTTCAAAGATGCTGAGAAAGGGAATGAGAAGGCGGTGGAAGTGATGAAGAACGCGTTGAGGAAGGTTCTTGTTCACTATTACCCTCTTGCTGGGAGGCTAAGTATCAGCTCAGAAGGGAAACTCATAGTGGAATGCACAGGGGAGGGTGCCCTGTTTGTTGAGGCTGAAGCAAATTGTTCTATGGAAGAGATTGGTGACATCACAAAGCCAGACCCAGGGACTCTTTGTAAGCTGGTGACCAAGTTCAAATGTGGAGGTTTTTCTCTTGGGCTGTGCATGAATCACTGCATGTTTGATGGNATTGGTGCTATGGAGTTTGTGAACTCTTGGGGGGAAGTAGCAAGAGGCCTACCGCTCTCTATCCCTCCAGTTCTAGACAGAAGCATACTCAAGGCTAGGAACCCACCAAAGGTGGAGCATTTGCACCAAGAATTTGCTGACATTGAAGACAANTCCAACACCAACAGCTTGTATGAAGAAGAGAACATGGTTTATAGGTCCTTCTGTTTTGACCCTGAGAGACTAAAGCAACTGAAGAAGAAAGCCATGGAAGATGGGGCTCTTGACTCTTGCACAACTTTTGAAGTCCTCTCTGCATTTGTATGGGTAGCTAGAACCAAAGCACTGAAGATGTTGCCAGAACAGGAAACTAAGCTCCTCTTTGCTGTTGATGGGAGGGCTAAGTTTAACCCACCACTCCCTAAAGGGTACTGTGAACTATCAGAAAGGCCCTTTTCAAATGCTGTGAGGCTCATTCAAGATGCAATCAAGATGGTNACAGACAGTTACATGAGATCAGCTATTGATTATTTTGAGGTGACAAGGGCTAGGCCATCTCTAGCTTGCACCCTTCTGATCACAACTTGGTCTAGGCTTGGNTTCCACACCACTGACTTTGGATGGGGAGAGCCTGTTCTCTCAGGGCCAGTGTCACTGCCTGAGAAGGAAGTGATTTTGTTCCTTTCTCATGGACAAGAGAGGAGAAGCATCAATGTGCTTCTGGGTTTGCCAGCTCCTGTCATGAAGATCTTCCAAGATTTGATGATGCAGATATAAGGGTCCTATATATATTTAATATGATTCTGTTATTTTTTAGTATATGATT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02163	15221	17788	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K15400	HHT1	EC:2.3.1.188	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002163s00037008.1	PF02458.10	Transferase	12	396	1.40E-83

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.071
SRR1783600	control	14.801
SRR1783602	moderate drought stress	18.348
SRR1811619	moderate drought stress	18.104

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.009
DRR006520	Root Summer glycyrrhizin high producing strain	1.700
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	4.121
DRR006524	Root Summer glycyrrhizin low producing strain	3.973
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.405
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.368

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	92.168
SRR2868004	Drought Stress(Tissue:root)	41.456
SRR2967015	Control (Tissue:root)	59.186

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.875
SRR9715740	Leave	0.869
SRR9715741	Leave	1.431
SRR9715739	Root	62.130
SRR9715742	Root	38.311
SRR9715743	Root	42.860

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.040
SRR8749028	MeJA induced 9h	0.046
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	4.809
SRR8749031	Uninduced	7.719
SRR8749032	Uninduced	3.108

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	168.156
SRR8400027	Control-Root	168.776