Gene detail information of Glyur002167s00037606.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57500.1 | 1.00E-115 | Galactosyltransferase family protein |
| NR | XP_008453610.1 | 2.00E-163 | PREDICTED: uncharacterized protein LOC103494272 [Cucumis melo] |
| trEMBL | tr|W9S0A0|W9S0A0_9ROSA | 5.00E-162 | Uncharacterized protein {ECO:0000313|EMBL:EXB80932.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02167 | 11710 | 12663 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002167s00037606.1 | PF01762.16 | Galactosyl_T | 79 | 200 | 5.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.040 |
| SRR1811619 | moderate drought stress | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.702 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.684 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.097 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.156 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.052 |
| SRR2967015 | Control (Tissue:root) | 0.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.298 |
| SRR9715739 | Root | 0.442 |
| SRR9715742 | Root | 0.129 |
| SRR9715743 | Root | 0.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.202 |
| SRR8749028 | MeJA induced 9h | 21.777 |
| SRR8749029 | MeJA induced 9h | 5.563 |
| SRR8749030 | Uninduced | 1.717 |
| SRR8749031 | Uninduced | 1.036 |
| SRR8749032 | Uninduced | 1.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.498 |
| SRR8400027 | Control-Root | 0.048 |