Gene detail information of Glyur002175s00041164.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51830.14.00E-141pfkB-like carbohydrate kinase family protein
NRXP_004513694.10PREDICTED: putative fructokinase-5-like isoform X1 [Cicer arietinum]
COGYP_002521328.14.00E-115putative fructokinase [Thermomicrobium roseum DSM 5159]
Swissprottr|Q9FLH8|SCRK7_ARATH0Probable fructokinase-7
trEMBLtr|I1MQ49|I1MQ49_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G32530.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02175448510264+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00847E2.7.1.4, scrK EC:2.7.1.4 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006014  D-ribose metabolic process


molecular_function

GO:0004747  ribokinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002175s00041164.1PF00294.19PfkB243313.50E-76


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.661
SRR1783600control22.918
SRR1783602moderate drought stress15.167
SRR1811619moderate drought stress15.289

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.433
DRR006520Root Summer glycyrrhizin high producing strain19.311
DRR006521Root Winter glycyrrhizin high producing strain51.037
DRR006522Root Winter glycyrrhizin high producing strain48.830
DRR006523Root Summer glycyrrhizin low producing strain15.706
DRR006524Root Summer glycyrrhizin low producing strain15.041
DRR006525Leaf Summer glycyrrhizin high producing strain9.160
DRR006526Leaf Summer glycyrrhizin high producing strain9.014

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.908
SRR2868004Drought Stress(Tissue:root)19.198
SRR2967015Control (Tissue:root)20.072

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.010
SRR9715740Leave24.052
SRR9715741Leave26.929
SRR9715739Root14.330
SRR9715742Root18.788
SRR9715743Root17.952

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h56.306
SRR8749028MeJA induced 9h68.741
SRR8749029MeJA induced 9h106.568
SRR8749030Uninduced102.435
SRR8749031Uninduced219.431
SRR8749032Uninduced174.135

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.073
SRR8400027Control-Root24.212

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved