Gene detail information of Glyur002181s00036481.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40270.2 | 1.00E-114 | Protein kinase family protein |
| NR | KHN02093.1 | 0 | Putative LRR receptor-like serine/threonine-protein kinase [Glycine soja] |
| COG | YP_001958461.1 | 2.00E-13 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|C0LGQ4|MRH1_ARATH | 2.00E-158 | Probable LRR receptor-like serine/threonine-protein kinase MRH1 (Precursor) |
| trEMBL | tr|K7MQ76|K7MQ76_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06670.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02181 | 30608 | 35388 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.15.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002181s00036481.1 | PF08263.7 | LRRNT_2 | 12 | 55 | 1.20E-06 |
| Glyur002181s00036481.1 | PF07714.12 | Pkinase_Tyr | 378 | 633 | 8.20E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.265 |
| SRR1783600 | control | 4.312 |
| SRR1783602 | moderate drought stress | 3.300 |
| SRR1811619 | moderate drought stress | 3.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.969 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.901 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.195 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.222 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.087 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.460 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.931 |
| SRR2967015 | Control (Tissue:root) | 9.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.014 |
| SRR9715740 | Leave | 2.824 |
| SRR9715741 | Leave | 0.739 |
| SRR9715739 | Root | 0.413 |
| SRR9715742 | Root | 9.139 |
| SRR9715743 | Root | 6.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.031 |
| SRR8749028 | MeJA induced 9h | 0.104 |
| SRR8749029 | MeJA induced 9h | 0.009 |
| SRR8749030 | Uninduced | 0.140 |
| SRR8749031 | Uninduced | 0.061 |
| SRR8749032 | Uninduced | 0.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 20.634 |
| SRR8400027 | Control-Root | 32.789 |