Gene detail information of Glyur002190s00039276.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50020.2 | 2.00E-155 | DHHC-type zinc finger family protein |
| NR | XP_003518555.1 | 0 | PREDICTED: protein S-acyltransferase 8-like isoform 1 [Glycine max] |
| Swissprot | tr|Q9SB58|ZDH19_ARATH | 0 | Protein S-acyltransferase 8 |
| trEMBL | tr|I1JDC7|I1JDC7_SOYBN | 0 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02190 | 23648 | 35779 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16675 | ZDHHC9_14_18 | EC:2.3.1.225 | Hippo signaling pathway -fly | map04391 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002190s00039276.1 | PF01529.15 | zf-DHHC | 79 | 263 | 1.70E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.424 |
| SRR1783600 | control | 6.523 |
| SRR1783602 | moderate drought stress | 7.224 |
| SRR1811619 | moderate drought stress | 6.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.920 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.741 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.151 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.384 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.695 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.873 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.473 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.176 |
| SRR2967015 | Control (Tissue:root) | 17.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.354 |
| SRR9715740 | Leave | 10.644 |
| SRR9715741 | Leave | 10.634 |
| SRR9715739 | Root | 6.123 |
| SRR9715742 | Root | 9.368 |
| SRR9715743 | Root | 7.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.753 |
| SRR8749028 | MeJA induced 9h | 8.526 |
| SRR8749029 | MeJA induced 9h | 4.673 |
| SRR8749030 | Uninduced | 3.577 |
| SRR8749031 | Uninduced | 2.696 |
| SRR8749032 | Uninduced | 1.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.180 |
| SRR8400027 | Control-Root | 13.069 |