Gene detail information of Glyur002203s00035381.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05340.12.00E-98Peroxidase superfamily protein
NRXP_003602462.12.98E-126Peroxidase [Medicago truncatula]
Swissprottr|A7NY33|PER4_VITVI2.00E-127Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor)
trEMBLtr|G7J9S1|G7J9S1_MEDTR1.00E-126Class III peroxidase {ECO:0000313|EMBL:AES72713.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022032105923898-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002203s00035381.1PF00141.18peroxidase431131.80E-18
Glyur002203s00035381.1PF00141.18peroxidase1392341.90E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.444
SRR1783600control31.331
SRR1783602moderate drought stress45.235
SRR1811619moderate drought stress44.329

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.067
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.222
DRR006526Leaf Summer glycyrrhizin high producing strain0.152

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)113.615
SRR2868004Drought Stress(Tissue:root)56.846
SRR2967015Control (Tissue:root)112.808

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.620
SRR9715740Leave0.395
SRR9715741Leave0.761
SRR9715739Root17.400
SRR9715742Root16.097
SRR9715743Root15.722

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h264.624
SRR8749028MeJA induced 9h247.144
SRR8749029MeJA induced 9h178.735
SRR8749030Uninduced134.282
SRR8749031Uninduced50.054
SRR8749032Uninduced125.487

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root77.409
SRR8400027Control-Root56.568

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved