Gene detail information of Glyur002209s00037929.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69180.1 | 3.00E-22 | Plant-specific transcription factor YABBY family protein |
| NR | XP_004509753.1 | 8.31E-46 | PREDICTED: protein CRABS CLAW-like [Cicer arietinum] |
| Swissprot | tr|Q76EJ0|YABDL_ORYSJ | 2.00E-31 | Protein DROOPING LEAF |
| trEMBL | tr|K7K7W1|K7K7W1_SOYBN | 3.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G13350.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02209 | 31375 | 35201 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2C2-YABBY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002209s00037929.1 | PF04690.8 | YABBY | 15 | 33 | 2.10E-05 |
| Glyur002209s00037929.1 | PF04690.8 | YABBY | 45 | 118 | 2.60E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.291 |
| SRR1783600 | control | 0.237 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.199 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.120 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.296 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.070 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.067 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.075 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.242 |
| SRR9715743 | Root | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |