Gene detail information of Glyur002220s00035924.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37870.10phosphoenolpyruvate carboxykinase 1
NRXP_004509722.10PREDICTED: phosphoenolpyruvate carboxykinase [ATP]-like [Cicer arietinum]
COGYP_004658785.10phosphoenolpyruvate carboxykinase [Runella slithyformis DSM 19594]
Swissprottr|Q9T074|PCKA_ARATH0Phosphoenolpyruvate carboxykinase [ATP]
trEMBLtr|I1L4W3|I1L4W3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G33650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022203818544120-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01610E4.1.1.49, pckA EC:4.1.1.49 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006094  gluconeogenesis


molecular_function

GO:0004611  phosphoenolpyruvate carboxykinase activity

GO:0004612  phosphoenolpyruvate carboxykinase (ATP) activity

GO:0005524  ATP binding

GO:0017076  purine nucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002220s00035924.1PF01293.15PEPCK_ATP364292.50E-179


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.190
SRR1783600control0.208
SRR1783602moderate drought stress0.273
SRR1811619moderate drought stress0.311

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.128
DRR006526Leaf Summer glycyrrhizin high producing strain0.077

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.161
SRR2868004Drought Stress(Tissue:root)17.763
SRR2967015Control (Tissue:root)3.909

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.046
SRR9715740Leave0.008
SRR9715741Leave0.000
SRR9715739Root0.106
SRR9715742Root0.726
SRR9715743Root0.294

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.158
SRR8749028MeJA induced 9h2.356
SRR8749029MeJA induced 9h0.815
SRR8749030Uninduced33.095
SRR8749031Uninduced119.528
SRR8749032Uninduced13.052

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.126
SRR8400027Control-Root10.136

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved