Gene detail information of Glyur002222s00037901.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08850.10Leucine-rich repeat receptor-like protein kinase family protein
NRXP_007139651.10hypothetical protein PHAVU_008G047800g [Phaseolus vulgaris]
COGYP_001192956.15.00E-56two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q8VZG8|Y4885_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|V7B287|V7B287_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW11645.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0222253669212+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002222s00037901.1PF08263.7LRRNT_231726.70E-08
Glyur002222s00037901.1PF00560.28LRR_11491720.26
Glyur002222s00037901.1PF00560.28LRR_11741960.25
Glyur002222s00037901.1PF00560.28LRR_12712930.85
Glyur002222s00037901.1PF00560.28LRR_12953170.095
Glyur002222s00037901.1PF00560.28LRR_13203410.41
Glyur002222s00037901.1PF13516.1LRR_64855010.49
Glyur002222s00037901.1PF13855.1LRR_85355943.20E-07
Glyur002222s00037901.1PF00560.28LRR_16056270.021
Glyur002222s00037901.1PF00069.20Pkinase78010463.00E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.513
SRR1783600control1.515
SRR1783602moderate drought stress1.198
SRR1811619moderate drought stress1.204

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.989
DRR006520Root Summer glycyrrhizin high producing strain2.014
DRR006521Root Winter glycyrrhizin high producing strain0.034
DRR006522Root Winter glycyrrhizin high producing strain0.033
DRR006523Root Summer glycyrrhizin low producing strain1.434
DRR006524Root Summer glycyrrhizin low producing strain1.301
DRR006525Leaf Summer glycyrrhizin high producing strain1.542
DRR006526Leaf Summer glycyrrhizin high producing strain1.588

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.781
SRR2868004Drought Stress(Tissue:root)19.060
SRR2967015Control (Tissue:root)14.697

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.669
SRR9715740Leave18.409
SRR9715741Leave29.276
SRR9715739Root4.292
SRR9715742Root29.956
SRR9715743Root22.742

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.019
SRR8749028MeJA induced 9h2.734
SRR8749029MeJA induced 9h2.297
SRR8749030Uninduced2.340
SRR8749031Uninduced5.051
SRR8749032Uninduced6.273

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.220
SRR8400027Control-Root5.275

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved