Gene detail information of Glyur002222s00037905.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08850.10Leucine-rich repeat receptor-like protein kinase family protein
NRXP_004492928.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Cicer arietinum]
COGYP_004775215.15.00E-62RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8VZG8|Y4885_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBLtr|G7KU89|G7KU89_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES80539.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022223801241709+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002222s00037905.1PF08263.7LRRNT_2641015.80E-08
Glyur002222s00037905.1PF00560.28LRR_11782010.41
Glyur002222s00037905.1PF13855.1LRR_82513111.50E-08
Glyur002222s00037905.1PF13516.1LRR_65145351
Glyur002222s00037905.1PF00560.28LRR_15886050.34
Glyur002222s00037905.1PF13855.1LRR_86376982.50E-07
Glyur002222s00037905.1PF00069.20Pkinase81810847.60E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.229
SRR1783600control13.061
SRR1783602moderate drought stress17.279
SRR1811619moderate drought stress16.649

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.087
DRR006520Root Summer glycyrrhizin high producing strain5.004
DRR006521Root Winter glycyrrhizin high producing strain0.317
DRR006522Root Winter glycyrrhizin high producing strain0.279
DRR006523Root Summer glycyrrhizin low producing strain2.908
DRR006524Root Summer glycyrrhizin low producing strain2.486
DRR006525Leaf Summer glycyrrhizin high producing strain5.413
DRR006526Leaf Summer glycyrrhizin high producing strain5.367

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.039
SRR2868004Drought Stress(Tissue:root)8.292
SRR2967015Control (Tissue:root)8.297

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.393
SRR9715740Leave2.167
SRR9715741Leave3.759
SRR9715739Root2.367
SRR9715742Root8.406
SRR9715743Root7.537

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.017
SRR8749030Uninduced0.009
SRR8749031Uninduced0.011
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.324
SRR8400027Control-Root7.576

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved