Gene detail information of Glyur002238s00033932.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33950.19.00E-114Protein kinase superfamily protein
NRXP_003531338.10PREDICTED: serine/threonine-protein kinase SAPK2-like isoform 1 [Glycine max]
COGYP_004862245.12.00E-22protein kinase domain-containing protein [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|A2YNT8|SAPK2_ORYSI3.00E-163Serine/threonine-protein kinase SAPK2
trEMBLtr|I1KSY9|I1KSY9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G14210.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022383235336284-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002238s00033932.1PF00069.20Pkinase52556.30E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.262
SRR1783600control5.249
SRR1783602moderate drought stress3.807
SRR1811619moderate drought stress3.809

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.050
DRR006520Root Summer glycyrrhizin high producing strain3.990
DRR006521Root Winter glycyrrhizin high producing strain0.128
DRR006522Root Winter glycyrrhizin high producing strain0.167
DRR006523Root Summer glycyrrhizin low producing strain37.076
DRR006524Root Summer glycyrrhizin low producing strain37.299
DRR006525Leaf Summer glycyrrhizin high producing strain48.741
DRR006526Leaf Summer glycyrrhizin high producing strain48.765

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.728
SRR2868004Drought Stress(Tissue:root)2.397
SRR2967015Control (Tissue:root)2.782

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.715
SRR9715740Leave10.672
SRR9715741Leave18.613
SRR9715739Root1.329
SRR9715742Root8.066
SRR9715743Root6.828

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.678
SRR8749028MeJA induced 9h2.994
SRR8749029MeJA induced 9h1.685
SRR8749030Uninduced3.327
SRR8749031Uninduced2.465
SRR8749032Uninduced1.350

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.677
SRR8400027Control-Root11.342

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved