Gene detail information of Glyur002239s00038679.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G52560.10UDP-sugar pyrophosphorylase
NRXP_004502545.10PREDICTED: UDP-sugar pyrophospharylase-like [Cicer arietinum]
COGYP_003549096.12.00E-119UDP-sugar pyrophosphorylase [Coraliomargarita akajimensis DSM 45221]
Swissprottr|Q5W915|USP_PEA0UDP-sugar pyrophospharylase
trEMBLtr|I1JZ10|I1JZ10_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G42370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022392743537038-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12447USP EC:2.7.7.64 Pentose and glucuronate interconversions map00040
Galactose metabolismmap00052
Ascorbate and aldarate metabolismmap00053
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0070569  uridylyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.311
SRR1783600control28.382
SRR1783602moderate drought stress24.565
SRR1811619moderate drought stress24.599

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.434
DRR006520Root Summer glycyrrhizin high producing strain31.174
DRR006521Root Winter glycyrrhizin high producing strain25.077
DRR006522Root Winter glycyrrhizin high producing strain23.390
DRR006523Root Summer glycyrrhizin low producing strain20.545
DRR006524Root Summer glycyrrhizin low producing strain20.713
DRR006525Leaf Summer glycyrrhizin high producing strain16.052
DRR006526Leaf Summer glycyrrhizin high producing strain12.461

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.027
SRR2868004Drought Stress(Tissue:root)43.727
SRR2967015Control (Tissue:root)36.616

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.110
SRR9715740Leave15.839
SRR9715741Leave18.252
SRR9715739Root19.557
SRR9715742Root25.992
SRR9715743Root23.747

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.502
SRR8749028MeJA induced 9h39.498
SRR8749029MeJA induced 9h31.879
SRR8749030Uninduced32.602
SRR8749031Uninduced29.947
SRR8749032Uninduced42.422

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.105
SRR8400027Control-Root39.313

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved